Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548c-3p in AC Brain Sun Cluster 46 Table contains all genes in the AC Brain Sun cluster number 46. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 7107 GPR137B G protein-coupled receptor 137B [Source:HGNC Symbol;Acc:11862] P T 26523 EIF2C1 eukaryotic translation initiation factor 2C, 1 [Source:HGNC Symbol;Acc:3262] P T 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] T 23060 ZNF609 zinc finger protein 609 [Source:HGNC Symbol;Acc:29003] T 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] P T 8531 CSDA cold shock domain protein A [Source:HGNC Symbol;Acc:2428] T 10336 PCGF3 polycomb group ring finger 3 [Source:HGNC Symbol;Acc:10066] T 337867 UBAC2 UBA domain containing 2 [Source:HGNC Symbol;Acc:20486] zzz999 5534 PPP3R1 protein phosphatase 3, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9317] zzz999 9878 TOX4 TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:20161] T 7528 YY1 YY1 transcription factor [Source:HGNC Symbol;Acc:12856] P T 8539 API5 apoptosis inhibitor 5 [Source:HGNC Symbol;Acc:594] T 4891 SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 [Source:HGNC Symbol;Acc:10908] T 9972 NUP153 nucleoporin 153kDa [Source:HGNC Symbol;Acc:8062] T 26065 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24489] T 9349 RPL23 ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] zzz999 51071 DERA deoxyribose-phosphate aldolase (putative) [Source:HGNC Symbol;Acc:24269] T 22890 ZBTB1 zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:20259] T 26054 SENP6 SUMO1/sentrin specific peptidase 6 [Source:HGNC Symbol;Acc:20944] T 23041 MON2 MON2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29177] T 2037 EPB41L2 erythrocyte membrane protein band 4.1-like 2 [Source:HGNC Symbol;Acc:3379] P T 79684 C11orf61 chromosome 11 open reading frame 61 [Source:HGNC Symbol;Acc:26266] T 79048 SECISBP2 SECIS binding protein 2 [Source:HGNC Symbol;Acc:30972] zzz999 58517 RBM25 RNA binding motif protein 25 [Source:HGNC Symbol;Acc:23244] P T 10988 METAP2 methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:16672] zzz999 9849 zzz999 zzz999 P T 79022 TMEM106C transmembrane protein 106C [Source:HGNC Symbol;Acc:28775] zzz999 23131 GPATCH8 G patch domain containing 8 [Source:HGNC Symbol;Acc:29066] P T 201595 STT3B STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:30611] zzz999 54455 FBXO42 F-box protein 42 [Source:HGNC Symbol;Acc:29249] zzz999 64710 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923] zzz999 160897 GPR180 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:28899] P T 6925 TCF4 transcription factor 4 [Source:HGNC Symbol;Acc:11634] P T 83943 IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:14598] zzz999 11174 ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:HGNC Symbol;Acc:222] T 8914 TIMELESS timeless homolog (Drosophila) [Source:HGNC Symbol;Acc:11813] zzz999 9014 TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa [Source:HGNC Symbol;Acc:11533] zzz999 51552 RAB14 RAB14, member RAS oncogene family [Source:HGNC Symbol;Acc:16524] P T 10982 MAPRE2 microtubule-associated protein, RP/EB family, member 2 [Source:HGNC Symbol;Acc:6891] T 54834 GDAP2 ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:18010] T 84901 NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein [Source:HGNC Symbol;Acc:25906] zzz999 83941 TM2D1 TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142] zzz999 80349 WDR61 WD repeat domain 61 [Source:HGNC Symbol;Acc:30300] zzz999 4144 MAT2A methionine adenosyltransferase II, alpha [Source:HGNC Symbol;Acc:6904] P T 55186 SLC25A36 solute carrier family 25, member 36 [Source:HGNC Symbol;Acc:25554] T 6046 BRD2 bromodomain containing 2 [Source:HGNC Symbol;Acc:1103] T 1871 E2F3 E2F transcription factor 3 [Source:HGNC Symbol;Acc:3115] P T 55749 CCAR1 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:24236] zzz999 3148 HMGB2 high mobility group box 2 [Source:HGNC Symbol;Acc:5000] P T 1612 DAPK1 death-associated protein kinase 1 [Source:HGNC Symbol;Acc:2674] T 55752 SEPT11 septin 11 [Source:HGNC Symbol;Acc:25589] T 1954 MEGF8 multiple EGF-like-domains 8 [Source:HGNC Symbol;Acc:3233] zzz999 3053 SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:HGNC Symbol;Acc:4838] zzz999 5269 SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 [Source:HGNC Symbol;Acc:8950] zzz999 79707 NOL9 nucleolar protein 9 [Source:HGNC Symbol;Acc:26265] zzz999 57579 FAM135A family with sequence similarity 135, member A [Source:HGNC Symbol;Acc:21084] P T 55255 WDR41 WD repeat domain 41 [Source:HGNC Symbol;Acc:25601] zzz999 192670 EIF2C4 eukaryotic translation initiation factor 2C, 4 [Source:HGNC Symbol;Acc:18424] P T 84939 MUM1 melanoma associated antigen (mutated) 1 [Source:HGNC Symbol;Acc:29641] zzz999 9140 ATG12 ATG12 autophagy related 12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:588] T 10056 FARSB phenylalanyl-tRNA synthetase, beta subunit [Source:HGNC Symbol;Acc:17800] zzz999 25820 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) [Source:HGNC Symbol;Acc:689] zzz999 132001 C3orf31 chromosome 3 open reading frame 31 [Source:HGNC Symbol;Acc:25187] zzz999 6263 RYR3 ryanodine receptor 3 [Source:HGNC Symbol;Acc:10485] zzz999 55342 STRBP spermatid perinuclear RNA binding protein [Source:HGNC Symbol;Acc:16462] zzz999 26224 FBXL3 F-box and leucine-rich repeat protein 3 [Source:HGNC Symbol;Acc:13599] T 10114 HIPK3 homeodomain interacting protein kinase 3 [Source:HGNC Symbol;Acc:4915] P T 57695 USP37 ubiquitin specific peptidase 37 [Source:HGNC Symbol;Acc:20063] P T 22882 ZHX2 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:18513] P T 56990 CDC42SE2 CDC42 small effector 2 [Source:HGNC Symbol;Acc:18547] T 9528 TMEM59 transmembrane protein 59 [Source:HGNC Symbol;Acc:1239] zzz999 96764 TGS1 trimethylguanosine synthase 1 [Source:HGNC Symbol;Acc:17843] zzz999 56882 CDC42SE1 CDC42 small effector 1 [Source:HGNC Symbol;Acc:17719] zzz999 79934 ADCK4 aarF domain containing kinase 4 [Source:HGNC Symbol;Acc:19041] zzz999 51495 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 [Source:HGNC Symbol;Acc:24175] T 10447 FAM3C family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664] T 23332 CLASP1 cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:17088] P T 4026 LPP LIM domain containing preferred translocation partner in lipoma [Source:HGNC Symbol;Acc:6679] T 60526 C2orf43 chromosome 2 open reading frame 43 [Source:HGNC Symbol;Acc:26145] T 23111 SPG20 spastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:18514] P T 80267 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 [Source:HGNC Symbol;Acc:16787] T 29855 UBN1 ubinuclein 1 [Source:HGNC Symbol;Acc:12506] P T 10972 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998] P T 49854 ZNF295 zinc finger protein 295 [Source:HGNC Symbol;Acc:13083] P T 7879 RAB7A RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:9788] P T 11171 STRAP serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796] P T 22931 RAB18 RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244] P T 2230 FDX1 ferredoxin 1 [Source:HGNC Symbol;Acc:3638] T 7726 TRIM26 tripartite motif containing 26 [Source:HGNC Symbol;Acc:12962] T 64848 YTHDC2 YTH domain containing 2 [Source:HGNC Symbol;Acc:24721] T 55161 TMEM33 transmembrane protein 33 [Source:HGNC Symbol;Acc:25541] zzz999 257364 SNX33 sorting nexin 33 [Source:HGNC Symbol;Acc:28468] zzz999 27107 ZBTB11 zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:16740] P T 5591 PRKDC protein kinase, DNA-activated, catalytic polypeptide [Source:HGNC Symbol;Acc:9413] zzz999 64083 GOLPH3 golgi phosphoprotein 3 (coat-protein) [Source:HGNC Symbol;Acc:15452] P T 54977 SLC25A38 solute carrier family 25, member 38 [Source:HGNC Symbol;Acc:26054] zzz999 25940 FAM98A family with sequence similarity 98, member A [Source:HGNC Symbol;Acc:24520] T 84851 TRIM52 tripartite motif containing 52 [Source:HGNC Symbol;Acc:19024] zzz999 51663 ZFR zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277] T 8570 KHSRP KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] zzz999 80218 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:HGNC Symbol;Acc:29533] P T 51013 EXOSC1 exosome component 1 [Source:HGNC Symbol;Acc:17286] zzz999 10592 SMC2 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:14011] T 22889 KIAA0907 KIAA0907 [Source:HGNC Symbol;Acc:29145] zzz999 343099 CCDC18 coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:30370] T 10936 GPR75 G protein-coupled receptor 75 [Source:HGNC Symbol;Acc:4526] T 64969 MRPS5 mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:14498] zzz999 145407 C14orf37 chromosome 14 open reading frame 37 [Source:HGNC Symbol;Acc:19846] T 8603 FAM193A family with sequence similarity 193, member A [Source:HGNC Symbol;Acc:16822] zzz999 79137 FAM134A family with sequence similarity 134, member A [Source:HGNC Symbol;Acc:28450] zzz999 10657 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116] T 7874 USP7 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:HGNC Symbol;Acc:12630] zzz999 9501 RPH3AL rabphilin 3A-like (without C2 domains) [Source:HGNC Symbol;Acc:10296] T 91801 ALKBH8 alkB, alkylation repair homolog 8 (E. coli) [Source:HGNC Symbol;Acc:25189] zzz999 10552 ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703] zzz999 84904 C9orf100 chromosome 9 open reading frame 100 [Source:HGNC Symbol;Acc:25909] T 124912 SPACA3 sperm acrosome associated 3 [Source:HGNC Symbol;Acc:16260] zzz999 84881 RPUSD4 RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:25898] T 55234 SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:HGNC Symbol;Acc:18247] T 7403 KDM6A lysine (K)-specific demethylase 6A [Source:HGNC Symbol;Acc:12637] P T 83667 SESN2 sestrin 2 [Source:HGNC Symbol;Acc:20746] zzz999 4750 NEK1 NIMA (never in mitosis gene a)-related kinase 1 [Source:HGNC Symbol;Acc:7744] P T 54822 TRPM7 transient receptor potential cation channel, subfamily M, member 7 [Source:HGNC Symbol;Acc:17994] T 7320 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:HGNC Symbol;Acc:12473] P T 80254 CEP63 centrosomal protein 63kDa [Source:HGNC Symbol;Acc:25815] T 2073 ERCC5 excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:HGNC Symbol;Acc:3437] zzz999 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] T 5311 PKD2 polycystic kidney disease 2 (autosomal dominant) [Source:HGNC Symbol;Acc:9009] T 54856 GON4L gon-4-like (C. elegans) [Source:HGNC Symbol;Acc:25973] zzz999 8513 LIPF lipase, gastric [Source:HGNC Symbol;Acc:6622] zzz999 56993 TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:HGNC Symbol;Acc:18002] P T 100499483 C9orf174 chromosome 9 open reading frame 174 [Source:HGNC Symbol;Acc:29303] zzz999 6018 RLF rearranged L-myc fusion [Source:HGNC Symbol;Acc:10025] zzz999 7695 ZNF136 zinc finger protein 136 [Source:HGNC Symbol;Acc:12920] zzz999 29940 DSE dermatan sulfate epimerase [Source:HGNC Symbol;Acc:21144] T 9736 USP34 ubiquitin specific peptidase 34 [Source:HGNC Symbol;Acc:20066] T 64087 MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:HGNC Symbol;Acc:6937] zzz999 10979 FERMT2 fermitin family member 2 [Source:HGNC Symbol;Acc:15767] T 9703 KIAA0100 KIAA0100 [Source:HGNC Symbol;Acc:28960] T 389799 C9orf171 chromosome 9 open reading frame 171 [Source:HGNC Symbol;Acc:33776] T 221960 C7orf28B chromosome 7 open reading frame 28B [Source:HGNC Symbol;Acc:21717] zzz999 3658 IREB2 iron-responsive element binding protein 2 [Source:HGNC Symbol;Acc:6115] T 27125 AFF4 AF4/FMR2 family, member 4 [Source:HGNC Symbol;Acc:17869] P T

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